dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00266
Location and strand information: 27147 - 28685 (+)
Family: 3.A.1.12.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00267
Location and strand information: 28700 - 29431 (+)
Family: 3.A.1.12.8
Protein type: TC
Protein description: Carnitine transport ATP-binding protein OpuCA

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00268
Location and strand information: 29435 - 30091 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00269
Location and strand information: 30335 - 31681 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00270
Location and strand information: 31689 - 33524 (-)
Family: 3.A.1.135.6
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00271
Location and strand information: 33517 - 35280 (-)
Family: 3.A.1.135.6
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00272
Location and strand information: 35549 - 36151 (-)
Family: MarR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00273
Location and strand information: 36581 - 39019 (-)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9747
Protein molecular weight: 92756.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00274
Location and strand information: 39128 - 40825 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00275
Location and strand information: 40912 - 41802 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00276
Location and strand information: 41814 - 42752 (-)
Family: 3.A.1.1.29
Protein type: TC
Protein description: putative multiple-sugar transport system permease YteP

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00277
Location and strand information: 43032 - 44780 (+)
Family: 9.B.33.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00278
Location and strand information: 44761 - 45534 (+)
Family: HTH_AraC
Protein type: TF
Protein description: putative response regulatory protein

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00279
Location and strand information: 45661 - 47808 (-)
Family: GH42
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7219
Protein molecular weight: 80718.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00280
Location and strand information: 47861 - 49390 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Chemotaxis response regulator protein-glutamate methylesterase

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00281
Location and strand information: 49387 - 51201 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00282
Location and strand information: 51272 - 52102 (-)
Family: 3.A.1.1.18
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001063_11|CGC1
Gene ID: MGYG000001063_00283
Location and strand information: 52102 - 52989 (-)
Family: 3.A.1.1.20
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is human milk oligosaccharide download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001063_00266	hypothetical protein	TC	27147	28685	+	3.A.1.12.8
MGYG000001063_00267	Carnitine transport ATP-binding protein OpuCA	TC	28700	29431	+	3.A.1.12.8
MGYG000001063_00268	hypothetical protein	null	29435	30091	-	HAD_2
MGYG000001063_00269	hypothetical protein	null	30335	31681	+	Peptidase_S11
MGYG000001063_00270	putative ABC transporter ATP-binding protein	TC	31689	33524	-	3.A.1.135.6
MGYG000001063_00271	putative ABC transporter ATP-binding protein	TC	33517	35280	-	3.A.1.135.6
MGYG000001063_00272	hypothetical protein	TF	35549	36151	-	MarR
MGYG000001063_00273	hypothetical protein	CAZyme	36581	39019	-	GH95
MGYG000001063_00274	hypothetical protein	STP	39128	40825	-	SBP_bac_1
MGYG000001063_00275	L-arabinose transport system permease protein AraQ	TC	40912	41802	-	3.A.1.1.29
MGYG000001063_00276	putative multiple-sugar transport system permease YteP	TC	41814	42752	-	3.A.1.1.29
MGYG000001063_00277	hypothetical protein	TC	43032	44780	+	9.B.33.1.1
MGYG000001063_00278	putative response regulatory protein	TF	44761	45534	+	HTH_AraC
MGYG000001063_00279	hypothetical protein	CAZyme	45661	47808	-	GH42
MGYG000001063_00280	Chemotaxis response regulator protein-glutamate methylesterase	TF	47861	49390	-	HTH_AraC+HTH_AraC
MGYG000001063_00281	hypothetical protein	null	49387	51201	-	His_kinase
MGYG000001063_00282	L-arabinose transport system permease protein AraQ	TC	51272	52102	-	3.A.1.1.18
MGYG000001063_00283	L-arabinose transport system permease protein AraP	TC	52102	52989	-	3.A.1.1.20
Protein ID	Protein Name	Type	Start	End	Strand	Signature